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Intron Name: Anas_platyrhynchos_platyrhynchos_1_91589483_91594627_F


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
91589483 - 91594627

Intron Length:
5145

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CCT|GTGAGTGGG

5'SS Class:
major

3'SS Sequence:
TTTTTCTACCAAG|T

3'SS Class:
major_PPT

U2 Branch Point Sequence:
AATAAAT

U12 Branch Point Sequence:
TTTTTTCTACCA

Flanking Amino Acid:
LLAALAEAATFLSQRYASEF

Intron Amino Acid Position:
27

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
67.7
0.42
1.1
56.5
42.7

Major BPS
65.7
0.39
1
71.3
30.3

Major PPT
72.2
0.5
1.1
72.4
37.1

Minor 5ss
29.6
-2.3
3.2
41
45.3

Minor BPS
55.9
0.18
1.9
75.11
36.7

Associated Gene:

Gene:
PROS1

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

91589404 - 91622548
33145

91589404 - 91620486
31083