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Intron Name: Anas_platyrhynchos_platyrhynchos_1_91600156_91602332_F


Intron Information:

Intron Rank:
6

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
91600156 - 91602332

Intron Length:
2177

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTAGGAAGT

5'SS Class:
strong_major

3'SS Sequence:
TTTGTATTTCTAG|A

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTTTTAG

U12 Branch Point Sequence:
TTTTTAGTAACT

Flanking Amino Acid:
FMLPNKRDCKDINECVLYPN

Intron Amino Acid Position:
199

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
82.4
0.76
1
75.5
40.6

Major BPS
72.5
0.56
1.5
71.7
44.6

Major PPT
81.9
0.72
0.8
74.4
40.4

Minor 5ss
33.8
-1.8
3.3
49
46.8

Minor BPS
61.1
0.43
2.2
88.65
36.2

Associated Gene:

Gene:
PROS1

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

91589404 - 91622548
33145

91589404 - 91620486
31083