Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_91608864_91611344_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

91608864 - 91611344

Intron Length:

2481

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAAACCG

5'SS Class:

major

3'SS Sequence:

CTATTATTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTATTAT

U12 Branch Point Sequence:

GCAACATTAACA

Flanking Amino Acid:

KLSKDMKNCESIPLCIPLNL

Intron Amino Acid Position:

282

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.5

0.67

62.4

42.2

Major BPS

72.4

0.56

1.1

63.7

42.3

Major PPT

83.8

0.76

0.8

81.3

Minor 5ss

31.6

-2.1

3.1

45.5

Minor BPS

57.4

0.23

1.7

63.49

41.9

Associated Gene:

Gene:

PROS1

Ensembl Gene ID:

ENSAPLG00000011881

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032302

91589404 - 91622548

33145

ENSAPLT00000012414

91589404 - 91620486

31083