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Intron Name: Anas_platyrhynchos_platyrhynchos_1_92545873_92546722_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

92545873 - 92546722

Intron Length:

850

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGATGA

5'SS Class:

strong_major

3'SS Sequence:

GGCTTCATACCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCTTCAT

U12 Branch Point Sequence:

TCACTGTTACCC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

68.7

39.1

Major BPS

69.6

0.49

1.3

73.6

41.8

Major PPT

64.5

0.33

55.9

43.4

Minor 5ss

35.9

-1.6

3.3

47.3

48.1

Minor BPS

44.8

-0.4

2.2

55.69

42.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020824

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048118

92538823 - 92546844

8022