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Intron Name: Anas_platyrhynchos_platyrhynchos_1_92552856_92554456_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

92552856 - 92554456

Intron Length:

1601

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAT|GTTCATTTC

5'SS Class:

weak_major

3'SS Sequence:

GTCATCTTGCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCCAT

U12 Branch Point Sequence:

ACCTCTGCAACA

Flanking Amino Acid:

TGWGAIKENSITLQEARVRI

Intron Amino Acid Position:

105

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

54.3

0.1

1.3

60.8

38.8

Major BPS

77.3

0.68

1.2

86.7

32.3

Major PPT

68.6

0.42

1.1

61.4

44.4

Minor 5ss

41.8

-0.9

3.1

57.8

40.3

Minor BPS

46.3

-0.2

2.2

57.18

42.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003490

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038062

92545934 - 92558076

12143

ENSAPLT00000003551

92550231 - 92556126

5896