Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_92582136_92582753_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

92582136 - 92582753

Intron Length:

618

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTTTGTATT

5'SS Class:

major

3'SS Sequence:

TCATGTTTTCAAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAA

U12 Branch Point Sequence:

TGCTTCTGAAAC

Flanking Amino Acid:

CFDESDELFCVVPEWNCNSS

Intron Amino Acid Position:

501

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.7

0.51

1.2

77.4

36.9

Major BPS

82.1

0.8

71.6

36.4

Major PPT

69.6

0.44

1.1

67.4

42.7

Minor 5ss

44.3

-0.6

2.5

58.3

40.2

Minor BPS

57.1

0.2

1.6

65.07

40.1

Associated Gene:

Gene:

TMPRSS7

Ensembl Gene ID:

ENSAPLG00000003248

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047637

92572585 - 92604914

32330

ENSAPLT00000003308

92574448 - 92610884

36437