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Intron Name: Anas_platyrhynchos_platyrhynchos_1_92596551_92600369_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

92596551 - 92600369

Intron Length:

3819

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGATGA

5'SS Class:

strong_major

3'SS Sequence:

CTTTCTCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTCAC

U12 Branch Point Sequence:

CAATGCTTAATC

Flanking Amino Acid:

LSVAQNVQHVMNLVYRTSSF

Intron Amino Acid Position:

126

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.8

0.77

0.9

70.5

36.3

Major BPS

77.5

0.68

79.6

Major PPT

90.4

0.91

0.6

88.5

Minor 5ss

37.4

-1.4

44.6

45.1

Minor BPS

59.1

0.27

1.8

64.14

41.7

Associated Gene:

Gene:

TMPRSS7

Ensembl Gene ID:

ENSAPLG00000003248

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047637

92572585 - 92604914

32330

ENSAPLT00000003308

92574448 - 92610884

36437