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Intron Name: Anas_platyrhynchos_platyrhynchos_1_92604915_92610832_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

92604915 - 92610832

Intron Length:

5918

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGCAGC

5'SS Class:

strong_major

3'SS Sequence:

TATTTTTTTTTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TTTTTTTTACTT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.92

0.9

76.2

39.9

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

89.4

0.89

0.7

89.2

27.3

Minor 5ss

39.7

-1.2

2.9

52.1

44.7

Minor BPS

70.1

0.71

1.5

86.64

33.8

Associated Gene:

Gene:

TMPRSS7

Ensembl Gene ID:

ENSAPLG00000003248

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003308

92574448 - 92610884

36437