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Intron Name: Anas_platyrhynchos_platyrhynchos_1_92626047_92630187_R


Intron Information:

Intron Rank:
4

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
92626047 - 92630187

Intron Length:
4141

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTAACACCC

5'SS Class:
major

3'SS Sequence:
TGCATCTGGACAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TGTGCAT

U12 Branch Point Sequence:
TGCATCTGGACA

Flanking Amino Acid:
CYKGDPSWFHRKAQQNRRGF

Intron Amino Acid Position:
153

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
75.3
0.6
1.2
63.4
41.4

Major BPS
59.8
0.25
1.5
71.4
45.1

Major PPT
61
0.25
1.1
56.7
43.3

Minor 5ss
38.8
-1.3
3.1
52.4
44.2

Minor BPS
50.4
0
1.5
60.23
39.4

Associated Gene:

Gene:
TAGLN3

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

92625485 - 92636954
11470