Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_92673004_92673839_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

92673004 - 92673839

Intron Length:

836

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTTTGTTTG

5'SS Class:

major

3'SS Sequence:

TTTTTCTATAAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCTAT

U12 Branch Point Sequence:

TTTTCTATAAAG

Flanking Amino Acid:

VLTSQPQNKELRSPLCSGFV

Intron Amino Acid Position:

898

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.3

0.62

1.1

72.6

39.2

Major BPS

73.8

0.59

1.3

72.8

Major PPT

77.3

0.62

79.5

31.9

Minor 5ss

46.3

-0.4

2.4

58.6

Minor BPS

63.6

0.29

1.8

73.73

38.3

Associated Gene:

Gene:

PHLDB2

Ensembl Gene ID:

ENSAPLG00000002653

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034045

92654232 - 92718464

64233

ENSAPLT00000020515

92654232 - 92735941

81710

ENSAPLT00000045630

92654232 - 92708001

53770