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Intron Name: Anas_platyrhynchos_platyrhynchos_1_92704694_92707955_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

92704694 - 92707955

Intron Length:

3262

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATCAAT

5'SS Class:

strong_major

3'SS Sequence:

GTTTTCCCTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTAAG

U12 Branch Point Sequence:

TTTTCCCTACAG

Flanking Amino Acid:

SNISFQNVGSDSSKIMAEYS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.8

0.75

79.8

35.1

Major BPS

55.4

0.13

1.6

63.6

42.5

Major PPT

0.76

0.8

77.4

31.5

Minor 5ss

41.1

-1

2.9

57.5

46.8

Minor BPS

53.3

-0

2.1

69.58

43.3

Associated Gene:

Gene:

PHLDB2

Ensembl Gene ID:

ENSAPLG00000002653

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020515

92654232 - 92735941

81710

ENSAPLT00000047602

92654232 - 92735941

81710

ENSAPLT00000002716

92654232 - 92708001

53770

ENSAPLT00000045630

92654232 - 92708001

53770

ENSAPLT00000041050

92654232 - 92735941

81710

ENSAPLT00000034045

92654232 - 92718464

64233