Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_93379462_93380169_F

Intron Information:

Intron Rank:

139208

Intron Class:

major

Intron Phase:

Intron Coordinates:

93379462 - 93380169

Intron Length:

708

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGTGCT

5'SS Class:

strong_major

3'SS Sequence:

ATTGAAATTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

CATTTTTTAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

0.9

74.9

35.3

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

0.43

60.3

44.1

Minor 5ss

28.5

-2.5

3.4

40.8

45.6

Minor BPS

72.8

0.79

1.1

36.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024930

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046322

93356454 - 93380531

24078