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Intron Name: Anas_platyrhynchos_platyrhynchos_1_93660438_93661818_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

93660438 - 93661818

Intron Length:

1381

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGAACC

5'SS Class:

strong_major

3'SS Sequence:

TTGTTATTTATAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTAAAT

U12 Branch Point Sequence:

TTTAAATAAACA

Flanking Amino Acid:

METLTFDTPDGPKQWGEVSN

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.8

0.8

0.9

74.3

34.1

Major BPS

82.3

0.8

0.9

87.6

25.7

Major PPT

82.1

0.72

0.8

77.3

Minor 5ss

34.9

-1.7

2.9

42.4

38.2

Minor BPS

49.2

-0

2.1

70.68

40.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013802

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014376

93659870 - 93679862

19993

ENSAPLT00000014374

93660181 - 93679862

19682