Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_93747198_93752588_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

93747198 - 93752588

Intron Length:

5391

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTT|GTAAGTACT

5'SS Class:

major

3'SS Sequence:

ATGTTTTTCACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGTTGAT

U12 Branch Point Sequence:

ATGTTTTTCACA

Flanking Amino Acid:

SVEGALCLCVFFEELIYTYR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.2

0.67

79.2

33.9

Major BPS

72.4

0.56

1.1

63.1

44.4

Major PPT

81.3

0.7

0.9

76.3

37.2

Minor 5ss

40.9

-1

2.8

58.9

39.3

Minor BPS

57.8

0.24

1.7

68.54

38.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013836

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014422

93747064 - 93756116

9053