Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_93761705_93763222_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

93761705 - 93763222

Intron Length:

1518

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGATG

5'SS Class:

strong_major

3'SS Sequence:

TTTTCATCTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

AGTTAAGTAATT

Flanking Amino Acid:

NAALVQRSLEVISGLKLTRL

Intron Amino Acid Position:

127

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.8

78.6

37.3

Major BPS

100

1.24

0.5

100

Major PPT

86.4

0.82

0.7

78.3

35.1

Minor 5ss

30.4

-2.2

3.2

38.7

46.6

Minor BPS

46.1

-0.2

2.3

69.57

41.1

Associated Gene:

Gene:

CIP2A

Ensembl Gene ID:

ENSAPLG00000013921

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014543

93760577 - 93784936

24360