Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_93815416_93816737_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

93815416 - 93816737

Intron Length:

1322

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGC|GTAAGTCTG

5'SS Class:

major

3'SS Sequence:

TGTCTTTTGACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAC

U12 Branch Point Sequence:

TTTTTTTTTACT

Flanking Amino Acid:

AALGEPGKKSQPATKTGGTL

Intron Amino Acid Position:

207

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.4

0.43

1.4

63.6

48.1

Major BPS

86.6

0.91

0.8

77.7

36.7

Major PPT

78.9

0.65

75.8

38.2

Minor 5ss

38.8

-1.3

45.9

42.4

Minor BPS

0.84

1.5

91.27

31.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004420

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036474

93809253 - 93848098

38846

ENSAPLT00000004828

93805731 - 93845265

39535