Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_93818537_93818663_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

93818537 - 93818663

Intron Length:

127

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTT|GTAAGCAGC

5'SS Class:

major

3'SS Sequence:

TTTGTGAAACCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTCAC

U12 Branch Point Sequence:

ACTCACTGAATT

Flanking Amino Acid:

GKLSSADIEIYLLEKSRVIF

Intron Amino Acid Position:

266

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.2

0.45

1.1

61.8

42.9

Major BPS

77.2

0.68

0.8

77.6

26.2

Major PPT

64.3

0.32

1.1

56.9

46.7

Minor 5ss

42.3

-0.9

2.9

58.1

40.7

Minor BPS

53.9

0.2

1.6

70.09

40.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004420

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036474

93809253 - 93848098

38846

ENSAPLT00000004828

93805731 - 93845265

39535