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Intron Name: Anas_platyrhynchos_platyrhynchos_1_93829494_93831189_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

93829494 - 93831189

Intron Length:

1696

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTTGTTTA

5'SS Class:

major

3'SS Sequence:

ATGTCTGTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTCAT

U12 Branch Point Sequence:

TTAAAGCTAATT

Flanking Amino Acid:

SFQTVSSLHKENLNKLMTNL

Intron Amino Acid Position:

654

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.8

0.66

1.1

77.9

32.4

Major BPS

84.8

0.86

1.1

85.7

34.9

Major PPT

75.1

0.56

65.9

44.8

Minor 5ss

46.2

-0.4

2.4

58.8

45.7

Minor BPS

43.6

-0.4

2.4

67.6

42.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004420

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036474

93809253 - 93848098

38846

ENSAPLT00000004828

93805731 - 93845265

39535