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Intron Name: Anas_platyrhynchos_platyrhynchos_1_93831278_93831496_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

93831278 - 93831496

Intron Length:

219

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGAAAA

5'SS Class:

strong_major

3'SS Sequence:

TTCCCCCCTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATGGAA

U12 Branch Point Sequence:

CCCTATGGAAAA

Flanking Amino Acid:

CIIPNESKTPGEMDAFLVLH

Intron Amino Acid Position:

683

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.8

0.82

0.9

78.7

29.9

Major BPS

54.5

0.11

1.4

55.4

Major PPT

75.6

0.58

0.7

70.2

23.8

Minor 5ss

38.9

-1.3

2.8

48.3

47.4

Minor BPS

37.2

-0.9

2.1

41.51

39.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004420

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036474

93809253 - 93848098

38846

ENSAPLT00000004828

93805731 - 93845265

39535