Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_93832790_93833171_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

93832790 - 93833171

Intron Length:

382

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGAAGT

5'SS Class:

strong_major

3'SS Sequence:

CTTCCTAAAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTAAA

U12 Branch Point Sequence:

TCTTCCTAAAAC

Flanking Amino Acid:

RIEFQKIVERRDALLVIQWN

Intron Amino Acid Position:

809

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

77.2

37.7

Major BPS

72.7

0.57

72.1

31.1

Major PPT

67.4

0.39

63.1

36.1

Minor 5ss

41.3

-1

2.9

58.1

46.1

Minor BPS

65.9

0.48

1.8

75.43

41.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004420

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036474

93809253 - 93848098

38846

ENSAPLT00000004828

93805731 - 93845265

39535