Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_93833428_93833656_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

93833428 - 93833656

Intron Length:

229

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTGAGTAGG

5'SS Class:

major

3'SS Sequence:

CCTTTCTCACCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTGAG

U12 Branch Point Sequence:

CCTTTCTCACCA

Flanking Amino Acid:

KNDLLLQLQAEQDTLADAEE

Intron Amino Acid Position:

895

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.3

0.46

1.1

62.1

43.9

Major BPS

55.8

0.15

1.5

55.1

42.1

Major PPT

76.8

0.6

0.9

70.3

Minor 5ss

32.6

-2

2.8

43.3

43.7

Minor BPS

50.2

1.9

62.43

44.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004420

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036474

93809253 - 93848098

38846

ENSAPLT00000004828

93805731 - 93845265

39535