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Intron Name: Anas_platyrhynchos_platyrhynchos_1_93835353_93835916_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

93835353 - 93835916

Intron Length:

564

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGAGAC

5'SS Class:

strong_major

3'SS Sequence:

CTTTCCTTGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTCAC

U12 Branch Point Sequence:

TTTTCCTTTCCT

Flanking Amino Acid:

DKLQMEEKLKKKEFEMSQLN

Intron Amino Acid Position:

1083

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

0.9

72.3

Major BPS

62.6

0.31

1.2

66.7

39.9

Major PPT

79.5

0.66

0.9

76.6

31.9

Minor 5ss

32.4

-2

3.4

41.9

39.1

Minor BPS

51.2

0.12

3.7

92.33

36.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004420

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036474

93809253 - 93848098

38846

ENSAPLT00000004828

93805731 - 93845265

39535