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Intron Name: Anas_platyrhynchos_platyrhynchos_1_93842871_93845121_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

93842871 - 93845121

Intron Length:

2251

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGGAAA

5'SS Class:

strong_major

3'SS Sequence:

CTTTCTGTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTGCAA

U12 Branch Point Sequence:

ATCTGTGCAATT

Flanking Amino Acid:

EVQLALEEAEGALEHEESKT

Intron Amino Acid Position:

1550

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.6

0.98

0.8

28.8

Major BPS

0.18

1.3

69.4

37.7

Major PPT

86.2

0.81

0.8

84.1

30.8

Minor 5ss

31.6

-2.1

3.1

46.4

Minor BPS

41.8

-0.5

2.4

61.57

43.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004420

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036474

93809253 - 93848098

38846

ENSAPLT00000004828

93805731 - 93845265

39535