Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_94112510_94112840_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

94112510 - 94112840

Intron Length:

331

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCAGA

5'SS Class:

strong_major

3'SS Sequence:

TGTCTTGTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTGAA

U12 Branch Point Sequence:

TGGGCCTTCATT

Flanking Amino Acid:

GLKYNPRPGKIIIYDIHGDK

Intron Amino Acid Position:

1850

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.5

0.93

0.9

38.6

Major BPS

79.4

0.73

0.9

69.6

37.5

Major PPT

0.74

0.9

80.5

Minor 5ss

38.7

-1.3

2.8

49.1

46.7

Minor BPS

0.27

1.9

72.1

45.3

Associated Gene:

Gene:

CRYBG3

Ensembl Gene ID:

ENSAPLG00000004185

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037234

94062387 - 94157403

95017

ENSAPLT00000004320

94057258 - 94158403

101146