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Intron Name: Anas_platyrhynchos_platyrhynchos_1_94124033_94124919_F


Intron Information:

Intron Rank:
10

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
94124033 - 94124919

Intron Length:
887

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTAAGCACT

5'SS Class:
strong_major

3'SS Sequence:
TCATGTTTTCTAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
AAATCAT

U12 Branch Point Sequence:
ATTGTTTGAAAT

Flanking Amino Acid:
LKVQMPMNVKMIIYEKTHFG

Intron Amino Acid Position:
2034

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
91.3
0.97
0.8
84.4
33.5

Major BPS
71.6
0.54
1
72
33.1

Major PPT
77
0.61
0.9
69.4
41.5

Minor 5ss
42
-0.9
2.9
58.6
45.7

Minor BPS
52.7
0.16
1.6
71.88
39.1

Associated Gene:

Gene:
CRYBG3

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

94062387 - 94157403
95017

94057258 - 94158403
101146