Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_94126965_94132324_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

94126965 - 94132324

Intron Length:

5360

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTAAGTAGT

5'SS Class:

major

3'SS Sequence:

TGTTGCCTCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAC

U12 Branch Point Sequence:

TATCTTCTAACT

Flanking Amino Acid:

VLLSFRFLQADFIESSVALF

Intron Amino Acid Position:

2121

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.61

1.1

75.1

40.8

Major BPS

84.6

0.86

0.8

83.9

22.3

Major PPT

0.52

0.9

70.3

36.4

Minor 5ss

40.4

-1.1

2.9

61.4

42.9

Minor BPS

60.6

0.41

1.6

79.1

36.5

Associated Gene:

Gene:

CRYBG3

Ensembl Gene ID:

ENSAPLG00000004185

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037234

94062387 - 94157403

95017

ENSAPLT00000004320

94057258 - 94158403

101146