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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_94140865_94149292_F

Intron Information:

Intron Rank:
17
Intron Class:
major
Intron Phase:
0
Intron Coordinates:
94140865 - 94149292
Intron Length:
8428

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
TAC|GTAAGGACG
5'SS Class:
major
3'SS Sequence:
ATCCTCCTCCCAG|G
3'SS Class:
major_PPT
U2 Branch Point Sequence:
TTTTCAT
U12 Branch Point Sequence:
CTTTTTTCATCC
Flanking Amino Acid:
TIKSLKPIEYVFAEPSISLF
Intron Amino Acid Position:
2301

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
72.5
0.53
1.3
67
44.2
Major BPS
100
1.24
0.5
100
0
Major PPT
74.6
0.55
0.8
65.7
35.4
Minor 5ss
34
-1.8
3.1
40.4
38.7
Minor BPS
51
0.01
1.8
65.49
40.8

Associated Gene:

Gene:
CRYBG3
Ensembl Gene ID:
ENSAPLG00000004185
Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000037234
94062387 - 94157403
95017
ENSAPLT00000004320
94057258 - 94158403
101146