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Intron Name: Anas_platyrhynchos_platyrhynchos_1_94149433_94152658_F


Intron Information:

Intron Rank:
18

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
94149433 - 94152658

Intron Length:
3226

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
ATT|GTGAGTATG

5'SS Class:
major

3'SS Sequence:
TTTCTGTATCCAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTAACAT

U12 Branch Point Sequence:
TTTTCTGTATCC

Flanking Amino Acid:
YTQSVWVRSGLWIAYEGCNF

Intron Amino Acid Position:
2347

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
73.4
0.55
1
72.6
38.2

Major BPS
71
0.52
1.1
77.7
35.3

Major PPT
81
0.7
0.9
73.6
40.9

Minor 5ss
36.5
-1.5
2.9
48.4
41.7

Minor BPS
57.3
0.21
2.2
77.75
38.7

Associated Gene:

Gene:
CRYBG3

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

94062387 - 94157403
95017

94057258 - 94158403
101146