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Intron Name: Anas_platyrhynchos_platyrhynchos_1_94162846_94163104_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

94162846 - 94163104

Intron Length:

259

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTTTT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTCTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TCCTTTCTAATG

Flanking Amino Acid:

LGCDSDPLTPGGKLPKLDSQ

Intron Amino Acid Position:

352

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.3

0.93

0.9

87.9

29.3

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

91.3

0.93

0.5

92.5

17.5

Minor 5ss

44.7

-0.6

3.2

66.4

45.1

Minor BPS

49.6

-0.1

1.7

54.49

41.9

Associated Gene:

Gene:

RIOX2

Ensembl Gene ID:

ENSAPLG00000004703

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004851

94159552 - 94172220

12669