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Intron Name: Anas_platyrhynchos_platyrhynchos_1_94171984_94172122_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

94171984 - 94172122

Intron Length:

139

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATA|GTGAGCATC

5'SS Class:

major

3'SS Sequence:

CCCTCTTGAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGTTGAC

U12 Branch Point Sequence:

CCCTCTTGAACA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.4

0.46

67.7

37.5

Major BPS

53.6

0.09

1.4

48.8

46.3

Major PPT

67.8

0.4

64.2

35.4

Minor 5ss

40.4

-1.1

53.7

38.6

Minor BPS

60.2

0.32

1.5

63.35

43.5

Associated Gene:

Gene:

RIOX2

Ensembl Gene ID:

ENSAPLG00000004703

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004851

94159552 - 94172220

12669