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Intron Name: Anas_platyrhynchos_platyrhynchos_1_94185011_94185826_R


Intron Information:

Intron Rank:
5

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
94185011 - 94185826

Intron Length:
816

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GCT|GTAAGTTTA

5'SS Class:
major

3'SS Sequence:
TACTTTCTCCTAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTTAC

U12 Branch Point Sequence:
TAGTTTTTACTT

Flanking Amino Acid:
TQNCSLELESYAYNEDDLML

Intron Amino Acid Position:
165

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
77
0.64
1.1
77.4
33.6

Major BPS
86.6
0.91
0.8
77.7
36.7

Major PPT
76.5
0.6
0.8
69.7
36.4

Minor 5ss
46.7
-0.3
2.8
68.1
42.7

Minor BPS
58.3
0.34
1.6
71.78
40.2

Associated Gene:

Gene:
GABRR3

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

94178814 - 94202037
23224