Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_94284172_94289316_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

94284172 - 94289316

Intron Length:

5145

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGAAGT

5'SS Class:

strong_major

3'SS Sequence:

TTCCATTTGTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTACAT

U12 Branch Point Sequence:

TTTTACATACTT

Flanking Amino Acid:

ASAQPVLHQSELMGPELAII

Intron Amino Acid Position:

454

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

0.9

73.3

37.3

Major BPS

82.7

0.81

0.9

89.3

26.1

Major PPT

76.4

0.59

76.4

37.3

Minor 5ss

29.9

-2.3

37.4

41.2

Minor BPS

54.5

0.22

2.1

81.94

39.5

Associated Gene:

Gene:

DCAF6

Ensembl Gene ID:

ENSAPLG00000004966

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040046

94244238 - 94325410

81173

ENSAPLT00000005181

94243901 - 94325410

81510

ENSAPLT00000044418

94244238 - 94325410

81173

ENSAPLT00000042652

94244238 - 94325410

81173