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Intron Name: Anas_platyrhynchos_platyrhynchos_1_94433211_94476154_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

94433211 - 94476154

Intron Length:

42944

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGCAG

5'SS Class:

strong_major

3'SS Sequence:

TCTTTCTGTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGGTGAT

U12 Branch Point Sequence:

TTTTGGTGATGT

Flanking Amino Acid:

ATLQAQLSVTDAITVLGLTD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.3

0.88

0.9

69.6

42.7

Major BPS

66.1

0.4

1.3

57.1

49.4

Major PPT

84.3

0.77

0.8

80.4

31.6

Minor 5ss

30.1

-2.3

3.2

37.6

47.1

Minor BPS

39.8

-0.6

2.7

68.24

48.3

Associated Gene:

Gene:

CD247

Ensembl Gene ID:

ENSAPLG00000005778

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043020

94433153 - 94485369

52217