Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_94478185_94479495_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

94478185 - 94479495

Intron Length:

1311

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGTAAT

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTGTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCTTAAT

U12 Branch Point Sequence:

ATGTCCATCACT

Flanking Amino Acid:

QLPGQDDVYNKLSRGHRDEY

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.8

0.87

0.9

89.1

24.2

Major BPS

74.6

0.61

1.1

75.5

35.1

Major PPT

89.5

0.89

0.7

88.2

29.1

Minor 5ss

39.8

-1.1

2.9

41.5

Minor BPS

57.9

0.33

2.1

79.39

42.5

Associated Gene:

Gene:

CD247

Ensembl Gene ID:

ENSAPLG00000005778

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043020

94433153 - 94485369

52217

ENSAPLT00000005982

94469361 - 94482970

13610