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Intron Name: Anas_platyrhynchos_platyrhynchos_1_94500976_94503610_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

94500976 - 94503610

Intron Length:

2635

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGAGTC

5'SS Class:

strong_major

3'SS Sequence:

TTTTGACCTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAC

U12 Branch Point Sequence:

TCTTTTTTGACC

Flanking Amino Acid:

KAIFPCPTSLVATTPSLVTS

Intron Amino Acid Position:

469

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

75.1

33.1

Major BPS

86.5

0.91

0.8

77.4

37.4

Major PPT

80.6

0.69

0.9

71.1

39.9

Minor 5ss

35.1

-1.7

3.5

47.6

42.6

Minor BPS

72.8

0.7

1.1

76.51

34.1

Associated Gene:

Gene:

POU2F1

Ensembl Gene ID:

ENSAPLG00000005929

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018419

94497050 - 94542419

45370

ENSAPLT00000034796

94497050 - 94574591

77542

ENSAPLT00000006227

94497050 - 94547096

50047

ENSAPLT00000030233

94497050 - 94542419

45370

ENSAPLT00000048210

94497050 - 94542419

45370

ENSAPLT00000025603

94497275 - 94555164

57890

ENSAPLT00000045765

94497275 - 94547096

49822

ENSAPLT00000020408

94497275 - 94542419

45145

ENSAPLT00000043882

94497050 - 94542419

45370