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Intron Name: Anas_platyrhynchos_platyrhynchos_1_94523210_94528871_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

94523210 - 94528871

Intron Length:

5662

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCCTT

5'SS Class:

strong_major

3'SS Sequence:

CTGTTTCCTTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCTT

U12 Branch Point Sequence:

TGTTTCCTTAAG

Flanking Amino Acid:

PLSQPIQIAQDLQHLQQLQQ

Intron Amino Acid Position:

165

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.2

0.85

0.9

77.8

38.7

Major BPS

39.5

-0.6

4.3

85.7

34.9

Major PPT

72.1

0.5

Minor 5ss

38.4

-1.3

3.3

55.8

48.4

Minor BPS

46.2

-0.4

2.1

42.9

Associated Gene:

Gene:

POU2F1

Ensembl Gene ID:

ENSAPLG00000005929

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027475

94518693 - 94574562

55870

ENSAPLT00000018419

94497050 - 94542419

45370

ENSAPLT00000043882

94497050 - 94542419

45370