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Intron Name: Anas_platyrhynchos_platyrhynchos_1_94542329_94547068_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

94542329 - 94547068

Intron Length:

4740

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTGGGTACC

5'SS Class:

strong_major

3'SS Sequence:

TGTTTCAATGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCAAT

U12 Branch Point Sequence:

TGTTACTTCATC

Flanking Amino Acid:

MLDCSDYVLDSRMNNPSET

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.4

0.76

0.9

74.9

35.3

Major BPS

76.9

0.67

1.2

31.9

Major PPT

76.8

0.6

71.3

38.6

Minor 5ss

30.2

-2.3

2.9

36.9

40.4

Minor BPS

58.2

0.24

1.9

72.11

39.1

Associated Gene:

Gene:

POU2F1

Ensembl Gene ID:

ENSAPLG00000005929

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045765

94497275 - 94547096

49822

ENSAPLT00000006227

94497050 - 94547096

50047