Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_94635189_94635912_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

94635189 - 94635912

Intron Length:

724

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTGAGCATC

5'SS Class:

major

3'SS Sequence:

TTCTTTTCTGAAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATTAT

U12 Branch Point Sequence:

TCTAACATAATT

Flanking Amino Acid:

EVWPNVFIAEKSVAVNKSRL

Intron Amino Acid Position:

147

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.2

0.64

35.1

Major BPS

76.9

0.67

66.3

40.4

Major PPT

80.4

0.68

0.9

82.9

Minor 5ss

40.2

-1.1

52.3

38.8

Minor BPS

54.3

0.21

1.8

74.84

41.8

Associated Gene:

Gene:

DUSP27

Ensembl Gene ID:

ENSAPLG00000006438

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006671

94629968 - 94639038

9071