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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_94663708_94663971_R

Intron Information:

Intron Rank:
10
Intron Class:
major
Intron Phase:
0
Intron Coordinates:
94663708 - 94663971
Intron Length:
264

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
CAG|GTCAGTTTC
5'SS Class:
strong_major
3'SS Sequence:
TTTCTTCATACAG|A
3'SS Class:
strong_PPT
U2 Branch Point Sequence:
TTTACAT
U12 Branch Point Sequence:
TGTTTCTTCATA
Flanking Amino Acid:
RVILDAGRFQKMKAESSRYD
Intron Amino Acid Position:
347

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
82.8
0.77
1.2
82.3
32.2
Major BPS
82.7
0.81
0.9
89.3
26.1
Major PPT
85.4
0.8
0.8
80.9
30.1
Minor 5ss
40.2
-1.1
2.8
53
44.1
Minor BPS
64.7
0.46
1.7
75.34
36.5

Associated Gene:

Gene:
MAEL
Ensembl Gene ID:
ENSAPLG00000006696
Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000006967
94662725 - 94674153
11429