About Basic Search Advanced Search Downloads

© 2019-2022 Kanadia Lab,
PNB, Uconn

Construction by: Audrey Weber

Contact Us

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_94666368_94666901_R

Intron Information:

Intron Rank:
7
Intron Class:
major
Intron Phase:
1
Intron Coordinates:
94666368 - 94666901
Intron Length:
534

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
CAG|GTGGGAAAT
5'SS Class:
major
3'SS Sequence:
CTCTGAGCTACAG|G
3'SS Class:
major_PPT
U2 Branch Point Sequence:
TTCTGAC
U12 Branch Point Sequence:
CTGTTCTGACCT
Flanking Amino Acid:
WCLERMASVAGIESHLELLT
Intron Amino Acid Position:
234

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
79.7
0.7
0.9
76.8
33.7
Major BPS
81.4
0.78
0.9
71.3
36.7
Major PPT
69.3
0.43
1
61.1
39.3
Minor 5ss
28.3
-2.5
3.2
39
46.4
Minor BPS
53.9
0.2
1.8
71.85
45.3

Associated Gene:

Gene:
MAEL
Ensembl Gene ID:
ENSAPLG00000006696
Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000006967
94662725 - 94674153
11429