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Intron Name: Anas_platyrhynchos_platyrhynchos_1_94692182_94693242_F


Intron Information:

Intron Rank:
2

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
94692182 - 94693242

Intron Length:
1061

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
ACG|GTAACTCTC

5'SS Class:
major

3'SS Sequence:
TTTTGCCTTTCAG|A

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
CCCTGAC

U12 Branch Point Sequence:
AACCCCTGACTT

Flanking Amino Acid:
YKERDVSIVHDADLQIGKLM

Intron Amino Acid Position:
127

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
72.9
0.54
1.2
67.4
44

Major BPS
56.5
0.16
1.1
48.6
36.6

Major PPT
88.2
0.86
0.7
85.4
29.3

Minor 5ss
44.8
-0.6
2.9
63
41.5

Minor BPS
48.1
-0
1.7
62.03
41.9

Associated Gene:

Gene:
ILDR2

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

94684296 - 94715563
31268

94684296 - 94716085
31790