About Basic Search Advanced Search Downloads
Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_94740901_94742451_F


Intron Information:

Intron Rank:
132276

Intron Class:
major

Intron Phase:

Intron Coordinates:
94740901 - 94742451

Intron Length:
1551

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TGG|GTACGGCCA

5'SS Class:
major

3'SS Sequence:
CATATTTCAACAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TATTCAC

U12 Branch Point Sequence:
TCTCCCTGAAGT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
68.7
0.44
1.1
54.3
44.5

Major BPS
82.3
0.8
0.8
83.6
25.8

Major PPT
71.2
0.48
1
66.1
39.3

Minor 5ss
29.5
-2.3
3.3
30.8
42.6

Minor BPS
61
0.42
1.8
78.42
43.5

Associated Gene:

Gene:

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

94740519 - 94748914
8396