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Intron Name: Anas_platyrhynchos_platyrhynchos_1_94881618_94885756_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

94881618 - 94885756

Intron Length:

4139

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTGAGTGAT

5'SS Class:

strong_major

3'SS Sequence:

TTCTCTCCCGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTTAT

U12 Branch Point Sequence:

ACTTCTTTATTG

Flanking Amino Acid:

APVSVVVTALEPDYEVFLNA

Intron Amino Acid Position:

411

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.01

0.7

86.6

22.3

Major BPS

83.9

0.84

73.9

41.3

Major PPT

81.6

0.71

0.7

77.1

24.9

Minor 5ss

28.9

-2.4

3.2

39.6

46.4

Minor BPS

58.6

0.13

1.7

60.98

41.9

Associated Gene:

Gene:

PTGFRN

Ensembl Gene ID:

ENSAPLG00000007051

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007330

94849978 - 94911632

61655