Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_95041426_95067904_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

95041426 - 95067904

Intron Length:

26479

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGCTCT

5'SS Class:

strong_major

3'SS Sequence:

CCCTGCGCTGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTAAC

U12 Branch Point Sequence:

TAACCCTAACGC

Flanking Amino Acid:

GSYSAKMNLVVIPDSLRVTA

Intron Amino Acid Position:

145

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

72.3

40.1

Major BPS

0.55

71.8

31.4

Major PPT

68.4

0.42

0.9

60.8

35.2

Minor 5ss

-0.4

2.8

57.8

46.4

Minor BPS

43.8

-0.4

2.1

53.73

43.7

Associated Gene:

Gene:

IGSF3

Ensembl Gene ID:

ENSAPLG00000007123

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007392

95017293 - 95094834

77542

ENSAPLT00000039951

95040685 - 95094834

54150

ENSAPLT00000039703

95017293 - 95094834

77542