Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_95243646_95244114_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

95243646 - 95244114

Intron Length:

469

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAGGTAGA

5'SS Class:

major

3'SS Sequence:

TCTGTCTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATGTAC

U12 Branch Point Sequence:

TTCACCTGGATA

Flanking Amino Acid:

VYVFSTEMANKAAEAVLKGQ

Intron Amino Acid Position:

187

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.2

0.62

71.7

40.1

Major BPS

53.8

0.1

1.4

55.4

41.7

Major PPT

85.8

0.81

0.8

80.4

31.6

Minor 5ss

35.4

-1.7

41.6

39.3

Minor BPS

57.9

0.24

1.5

67.78

38.7

Associated Gene:

Gene:

BCL9

Ensembl Gene ID:

ENSAPLG00000020628

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032721

95237263 - 95250841

13579