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Intron Name: Anas_platyrhynchos_platyrhynchos_1_95250996_95257537_R


Intron Information:

Intron Rank:
9

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
95250996 - 95257537

Intron Length:
6542

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CTC|GTAAATAGT

5'SS Class:
major

3'SS Sequence:
TTTTTTTTTTCAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTAAAAT

U12 Branch Point Sequence:
TTAAAATGAATA

Flanking Amino Acid:
SQVEENQQSDS*

Intron Amino Acid Position:
455

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
63.2
0.31
1.3
67.8
43.1

Major BPS
70.6
0.51
1.1
75.9
34.4

Major PPT
100
1.12
0.4
100
0

Minor 5ss
38.3
-1.3
2.9
51.5
39.8

Minor BPS
46.6
-0.2
1.9
60.85
38.3

Associated Gene:

Gene:
ACP6

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

95250992 - 95264585
13594