Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_95260762_95262314_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

95260762 - 95262314

Intron Length:

1553

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATTGCC

5'SS Class:

strong_major

3'SS Sequence:

GATCCCCTGACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTGAT

U12 Branch Point Sequence:

TTTTCCTGATCC

Flanking Amino Acid:

HNCQRLKCLSRQKLKNALLQ

Intron Amino Acid Position:

244

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.8

0.82

0.9

75.1

33.1

Major BPS

78.8

0.71

67.6

40.6

Major PPT

0.32

57.7

38.3

Minor 5ss

-1.8

3.1

45.2

42.8

Minor BPS

70.6

0.63

1.7

83.6

35.6

Associated Gene:

Gene:

ACP6

Ensembl Gene ID:

ENSAPLG00000008285

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026415

95257534 - 95264585

7052

ENSAPLT00000008615

95250992 - 95264585

13594