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Intron Name: Anas_platyrhynchos_platyrhynchos_1_95262403_95263214_R


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
95262403 - 95263214

Intron Length:
812

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTTGGGGAG

5'SS Class:
major

3'SS Sequence:
TCTCGTTCCACAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TAGTGAT

U12 Branch Point Sequence:
GATCACAGAAGC

Flanking Amino Acid:
LAGLYQQQKEGSVVIVTDDA

Intron Amino Acid Position:
215

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
66.3
0.38
1.3
56
43

Major BPS
73.5
0.58
1.2
63.4
44.3

Major PPT
77.6
0.62
0.8
71.8
32.8

Minor 5ss
23.5
-3
3.4
28.5
43.9

Minor BPS
40.3
-0.7
2
49.57
39.3

Associated Gene:

Gene:
ACP6

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

95257534 - 95264585
7052

95250992 - 95264585
13594