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Intron Name: Anas_platyrhynchos_platyrhynchos_1_95263295_95263916_R


Intron Information:

Intron Rank:
2

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
95263295 - 95263916

Intron Length:
622

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CCT|GTGAGTCTC

5'SS Class:
major

3'SS Sequence:
TTCTCTCTTTCAG|C

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
ACCTCAC

U12 Branch Point Sequence:
TGCTACCTCACA

Flanking Amino Acid:
LSPTFKPAEVLVRSTNIFRN

Intron Amino Acid Position:
188

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
70.2
0.48
1.1
65.6
40.2

Major BPS
63.6
0.34
1
65.3
32.1

Major PPT
90
0.9
0.6
88.4
21.2

Minor 5ss
36.2
-1.6
3.1
54.6
42.6

Minor BPS
46.2
-0.3
2.2
61.88
43.8

Associated Gene:

Gene:
ACP6

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

95257534 - 95264585
7052

95250992 - 95264585
13594