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Intron Name: Anas_platyrhynchos_platyrhynchos_1_95364664_95365038_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

95364664 - 95365038

Intron Length:

375

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGAAAA

5'SS Class:

strong_major

3'SS Sequence:

ACTGTTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTAAA

U12 Branch Point Sequence:

CTATATTAAACT

Flanking Amino Acid:

DKETDAMYKLAQISPYSYYN

Intron Amino Acid Position:

321

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

0.9

78.7

29.9

Major BPS

82.6

0.81

0.8

82.2

24.5

Major PPT

83.5

0.75

0.8

80.8

36.2

Minor 5ss

32.9

-1.9

2.9

37.3

41.2

Minor BPS

54.7

0.23

1.9

73.34

43.6

Associated Gene:

Gene:

PDZK1

Ensembl Gene ID:

ENSAPLG00000008849

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028959

95362308 - 95372596

10289

ENSAPLT00000024924

95363228 - 95368466

5239

ENSAPLT00000009218

95363334 - 95368466

5133